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LINC00893 long intergenic non-protein coding RNA 893 [ Homo sapiens (human) ]

Gene ID: 100131434, updated on 18-Aug-2020

Summary

Official Symbol
LINC00893provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 893provided by HGNC
Primary source
HGNC:HGNC:44265
See related
Ensembl:ENSG00000241769
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in prostate (RPKM 6.8), lung (RPKM 5.9) and 25 other tissues See more

Genomic context

See LINC00893 in Genome Data Viewer
Location:
Xq28
Exon count:
10
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (149527591..149539752, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (148609130..148621312, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene IDS recombination region Neighboring gene iduronate 2-sulfatase Neighboring gene uncharacterized IDS2 Neighboring gene IDSP1 recombination region Neighboring gene iduronate 2-sulfatase pseudogene 1 Neighboring gene endothelium and lymphocyte associated ASCH domain 1 Neighboring gene heat shock transcription factor family, X-linked member 3 Neighboring gene MAGE family member A9B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Potential readthrough

Included gene: IDS

Other Names

  • gene W

Clone Names

  • FLJ17161, FLJ17999, FLJ42046, FLJ42669, FLJ44451, FLJ59110, AF011889.4

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027455.5 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF050144, AI863856, AK124040
    Related
    ENST00000618757.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    149527591..149539752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039766.1: Suppressed sequence

    Description
    NM_001039766.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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