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RPL6P17 ribosomal protein L6 pseudogene 17 [ Homo sapiens (human) ]

Gene ID: 100131229, updated on 17-Jun-2024

Summary

Official Symbol
RPL6P17provided by HGNC
Official Full Name
ribosomal protein L6 pseudogene 17provided by HGNC
Primary source
HGNC:HGNC:36914
See related
Ensembl:ENSG00000216754 AllianceGenome:HGNC:36914
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL6_4_660
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Genomic context

See RPL6P17 in Genome Data Viewer
Location:
6p23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (15102946..15104211, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (14976068..14977337, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (15103177..15104442, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928354 Neighboring gene uncharacterized LOC102724463 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24053 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24052 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:14676877-14677412 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:14706129-14707328 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24054 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:14730658-14731857 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:14733080-14734279 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16945 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:14743342-14744541 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:14784175-14784726 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancers GRCh37_chr6:14784727-14785278 and GRCh37_chr6:14785279-14785830 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:14804615-14805450 Neighboring gene Sharpr-MPRA regulatory region 9195 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24056 Neighboring gene NANOG hESC enhancer GRCh37_chr6:14822305-14822806 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:14823177-14823964 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:14824752-14825538 Neighboring gene NANOG hESC enhancer GRCh37_chr6:14832080-14832596 Neighboring gene Sharpr-MPRA regulatory region 9180 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24057 Neighboring gene uncharacterized LOC105374945 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24059 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24058 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:14876936-14877436 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:14879976-14880486 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:14880487-14880996 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:14883452-14884163 Neighboring gene MPRA-validated peak5674 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24061 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24062 Neighboring gene MPRA-validated peak5675 silencer Neighboring gene ReSE screen-validated silencer GRCh37_chr6:14958411-14958600 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:14997283-14997782 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:15013597-15013834 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:15017607-15018302 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:15021466-15022336 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:15022337-15023206 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24063 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:15066479-15067678 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:15077925-15078456 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:15096502-15096739 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:15104898-15105100 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:15132654-15133853 Neighboring gene RNA, 7SL, cytoplasmic 332, pseudogene Neighboring gene uncharacterized LOC105374946 Neighboring gene MPRA-validated peak5677 silencer

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010828.1 

    Range
    101..1366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    15102946..15104211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    14976068..14977337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)