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WDR86-AS1 WDR86 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100131176, updated on 14-Dec-2021

Summary

Official Symbol
WDR86-AS1provided by HGNC
Official Full Name
WDR86 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41186
See related
Ensembl:ENSG00000243836
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in spleen (RPKM 7.2), thyroid (RPKM 3.6) and 7 other tissues See more
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Genomic context

See WDR86-AS1 in Genome Data Viewer
Location:
7q36.1
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (151409161..151413354)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (151106247..151110440)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene chondroitin polymerizing factor 2 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 Neighboring gene negative regulator of ubiquitin like proteins 1 Neighboring gene WD repeat domain 86 Neighboring gene microRNA 3907 Neighboring gene crystallin gamma N Neighboring gene RNA, 7SL, cytoplasmic 76, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • WDR86 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034012.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    BC043579, BX092283, DA818594
    Related
    ENST00000690609.1
  2. NR_034013.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate exon in the 5' region, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    BC043579, BX092283
    Related
    ENST00000480632.5
  3. NR_109857.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate 3' exon structure, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    BX092283
    Related
    ENST00000489632.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    151409161..151413354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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