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LINC02901 long intergenic non-protein coding RNA 2901 [ Homo sapiens (human) ]

Gene ID: 100130967, updated on 11-Jun-2021

Summary

Official Symbol
LINC02901provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2901provided by HGNC
Primary source
HGNC:HGNC:21179
See related
Ensembl:ENSG00000203711
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C6orf99
Expression
Restricted expression toward testis (RPKM 17.6) See more
Orthologs
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Genomic context

See LINC02901 in Genome Data Viewer
Location:
6q25.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (158869814..158910353)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (159290846..159331385)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene ezrin Neighboring gene EZR antisense RNA 1 Neighboring gene oligosaccharyltransferase complex subunit pseudogene 1 Neighboring gene YKT6 v-SNARE homolog (S. cerevisiae) pseudogene Neighboring gene RNA, U6 small nuclear 293, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_160976.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL627422
    Related
    ENST00000653976.1
  2. NR_160977.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL627422
    Related
    ENST00000663340.1
  3. NR_160978.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL627422
    Related
    ENST00000486232.2
  4. NR_160979.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL627422
  5. NR_160980.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL627422
    Related
    ENST00000666927.1
  6. NR_160981.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL627422
    Related
    ENST00000655791.1
  7. NR_160982.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL627422
    Related
    ENST00000367073.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    158869814..158910353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001195032.1: Suppressed sequence

    Description
    NM_001195032.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  2. NM_001302839.1: Suppressed sequence

    Description
    NM_001302839.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  3. NM_001302840.1: Suppressed sequence

    Description
    NM_001302840.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  4. NM_001302841.1: Suppressed sequence

    Description
    NM_001302841.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  5. NM_001366493.1: Suppressed sequence

    Description
    NM_001366493.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  6. NM_001366494.1: Suppressed sequence

    Description
    NM_001366494.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
  7. NM_001366495.1: Suppressed sequence

    Description
    NM_001366495.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
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