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CSAG4 CSAG family member 4 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 100130935, updated on 11-Jun-2021

Summary

Official Symbol
CSAG4provided by HGNC
Official Full Name
CSAG family member 4 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:20923
See related
Ensembl:ENSG00000242599
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See CSAG4 in Genome Data Viewer
Location:
Xq28
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (152733827..152740985)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (151895976..151903136, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MAGE family member A2B Neighboring gene chondrosarcoma associated gene 1 Neighboring gene MAGE family member A12 Neighboring gene MAGE family member A2 Neighboring gene CSAG family member 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • CSAG family, member 2 pseudogene
  • CSAG family, member 4
  • chondrosarcoma-associated gene 2/3 protein pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_073432.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC244102, BC013171
    Related
    ENST00000361201.8

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    152733827..152740985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_029348.1: Suppressed sequence

    Description
    NG_029348.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
  2. NM_001025306.1: Suppressed sequence

    Description
    NM_001025306.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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