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LOC100130691 uncharacterized LOC100130691 [ Homo sapiens (human) ]

Gene ID: 100130691, updated on 23-Nov-2021

Summary

Gene symbol
LOC100130691
Gene description
uncharacterized LOC100130691
See related
Ensembl:ENSG00000213963
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 6.7), skin (RPKM 2.9) and 5 other tissues See more
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Genomic context

See LOC100130691 in Genome Data Viewer
Location:
2q31.2
Exon count:
9
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (177283508..177392691, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (178148236..178257419, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene NFE2 like bZIP transcription factor 2 Neighboring gene Sharpr-MPRA regulatory region 4724 Neighboring gene microRNA 3128 Neighboring gene microRNA 6512 Neighboring gene H3 histone pseudogene 7 Neighboring gene Sharpr-MPRA regulatory region 2066 Neighboring gene Sharpr-MPRA regulatory region 14377 Neighboring gene alkylglycerone phosphate synthase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: NFE2L2

Clone Names

  • FLJ44553, AC074286.1, DKFZp451M2119, DKFZp686G13152

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026966.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC019080, AC079305, AK126517, AL833088
    Related
    ENST00000397057.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    177283508..177392691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_182585.1: Suppressed sequence

    Description
    NM_182585.1: This RefSeq was permanently suppressed because there is support for the transcript but the predicted protein is not supported by current protein homology data.
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