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CECR7 cat eye syndrome chromosome region, candidate 7 [ Homo sapiens (human) ]

Gene ID: 100130418, updated on 13-May-2022

Summary

Official Symbol
CECR7provided by HGNC
Official Full Name
cat eye syndrome chromosome region, candidate 7provided by HGNC
Primary source
HGNC:HGNC:1845
See related
AllianceGenome:HGNC:1845
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CYCL; SAHL1
Expression
Biased expression in ovary (RPKM 7.0), brain (RPKM 1.6) and 13 other tissues See more
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Genomic context

See CECR7 in Genome Data Viewer
Location:
22q11.1
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (17036570..17060070)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (17713261..17736791)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (17517460..17540960)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene interleukin 9 receptor pseudogene Neighboring gene vomeronasal 1 receptor 9 pseudogene Neighboring gene interleukin 17 receptor A Neighboring gene ribosomal protein L31 pseudogene 62 Neighboring gene transmembrane protein 121B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: IL17RA

Other Names

  • cat eye syndrome chromosome region, candidate 7 (non-protein coding)
  • cytochrome c-like antigen

Clone Names

  • FLJ40726

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015352.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AY026052, BC008575
  2. NR_152825.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AY026052, BC008575, DB170302
  3. NR_152826.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC006946

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    17036570..17060070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    17713261..17736791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)