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LOC100130331 POTE ankyrin domain family, member F pseudogene [ Homo sapiens (human) ]

Gene ID: 100130331, updated on 13-May-2022

Summary

Gene symbol
LOC100130331
Gene description
POTE ankyrin domain family, member F pseudogene
See related
Ensembl:ENSG00000237250
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC100130331 in Genome Data Viewer
Location:
1q43
Exon count:
12
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (237862175..237928321)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (237273483..237339549)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (238025475..238091621)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ryanodine receptor 2 Neighboring gene RN7SK pseudogene 195 Neighboring gene microRNA 4428 Neighboring gene MT-CO1 pseudogene 38 Neighboring gene MT-ND2 pseudogene 27 Neighboring gene zona pellucida glycoprotein 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • DKFZp434B2115

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027247.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL122093, AL590396
    Related
    ENST00000450451.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    237862175..237928321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    237273483..237339549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)