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MIR124-2HG MIR124-2 host gene [ Homo sapiens (human) ]

Gene ID: 100130155, updated on 13-May-2022

Summary

Official Symbol
MIR124-2HGprovided by HGNC
Official Full Name
MIR124-2 host geneprovided by HGNC
Primary source
HGNC:HGNC:48723
See related
Ensembl:ENSG00000254377 AllianceGenome:HGNC:48723
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00966
Expression
Restricted expression toward brain (RPKM 3.5) See more
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Genomic context

See MIR124-2HG in Genome Data Viewer
Location:
8q12.3
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (64373218..64387504)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (64798633..64812914)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (65285775..65300061)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1414 Neighboring gene uncharacterized LOC105375877 Neighboring gene cytochrome c oxidase subunit 6C pseudogene 8 Neighboring gene microRNA 124-2 Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene uncharacterized LOC124900252 Neighboring gene BHLHE22 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

General gene information

Markers

Other Names

  • MIR124-2 host gene (non-protein coding)
  • long intergenic non-protein coding RNA 966

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034102.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon and includes an alternate 3' end, resulting in a shorter transcript compared to variant 1.
    Source sequence(s)
    AW162357, BM706891, BU726941, DB176551, R12755
    Related
    ENST00000520799.5
  2. NR_034103.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) contains alternate 5' and 3' exon structure, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AW162357, BM717762, BU726941, DB176551
  3. NR_109792.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AC013492, AK124231, AK124256
  4. NR_109793.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) contains alternate 5' and 3' exon structure, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AW162357, BQ639660, BU726941, BX096487, DB176551

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    64373218..64387504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    64798633..64812914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)