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COL4A2-AS2 COL4A2 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 100129836, updated on 15-Sep-2022

Summary

Official Symbol
COL4A2-AS2provided by HGNC
Official Full Name
COL4A2 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:39849
See related
Ensembl:ENSG00000224821 AllianceGenome:HGNC:39849
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in placenta (RPKM 2.5), fat (RPKM 0.7) and 10 other tissues See more
Orthologs
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Genomic context

See COL4A2-AS2 in Genome Data Viewer
Location:
13q34
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (110456397..110463287, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (109686826..109693757, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (111108744..111115634, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene collagen type IV alpha 2 chain Neighboring gene microRNA 8073 Neighboring gene small nucleolar RNA U13 Neighboring gene COL4A2 antisense RNA 1 Neighboring gene RAB20, member RAS oncogene family

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Other Names

  • COL4A2 antisense 2
  • COL4A2 antisense RNA 2 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_171022.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL159153
    Related
    ENST00000458403.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    110456397..110463287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    109686826..109693757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001267044.1: Suppressed sequence

    Description
    NM_001267044.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.