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CCDC152 coiled-coil domain containing 152 [ Homo sapiens (human) ]

Gene ID: 100129792, updated on 17-Jun-2019

Summary

Official Symbol
CCDC152provided by HGNC
Official Full Name
coiled-coil domain containing 152provided by HGNC
Primary source
HGNC:HGNC:34438
See related
Ensembl:ENSG00000198865
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CH5400
Expression
Broad expression in liver (RPKM 530.0), small intestine (RPKM 440.4) and 22 other tissues See more
Orthologs

Genomic context

See CCDC152 in Genome Data Viewer
Location:
5p12
Exon count:
9
Annotation release Status Assembly Chr Location
109.20190607 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (42756818..42802439)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (42756920..42802539)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 35 pseudogene Neighboring gene growth hormone receptor Neighboring gene SERPINE1 mRNA binding protein 1 pseudogene 6 Neighboring gene GHR downstream promoter region module B Neighboring gene selenoprotein P Neighboring gene PRELI domain containing 3B pseudogene 4 Neighboring gene peptidylprolyl isomerase A pseudogene 77

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

General protein information

Preferred Names
coiled-coil domain-containing protein 152

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134848.2NP_001128320.1  coiled-coil domain-containing protein 152

    See identical proteins and their annotated locations for NP_001128320.1

    Status: VALIDATED

    Source sequence(s)
    AC008945, AK127368, BC039102, DB450032, DB515085
    Consensus CDS
    CCDS47203.1
    UniProtKB/Swiss-Prot
    Q4G0S7
    UniProtKB/TrEMBL
    A0A024R043
    Related
    ENSP00000354888.5, ENST00000361970.10
    Conserved Domains (2) summary
    cl25632
    Location:54182
    type_I_hlyD; type I secretion membrane fusion protein, HlyD family
    cl26128
    Location:156242
    tRNA-synt_1g; tRNA synthetases class I (M)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    42756818..42802439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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