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MIR193BHG MIR193b-365a host gene [ Homo sapiens (human) ]

Gene ID: 100129781, updated on 23-Nov-2021

Summary

Official Symbol
MIR193BHGprovided by HGNC
Official Full Name
MIR193b-365a host geneprovided by HGNC
Primary source
HGNC:HGNC:51945
See related
Ensembl:ENSG00000262454
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lincNORS
Expression
Broad expression in fat (RPKM 4.2), testis (RPKM 3.7) and 17 other tissues See more
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Genomic context

See MIR193BHG in Genome Data Viewer
Location:
16p13.12
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (14301381..14331062)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (14395238..14424919)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene tRNA-Thr (anticodon CGT) 2-1 Neighboring gene Sharpr-MPRA regulatory region 5476 Neighboring gene Sharpr-MPRA regulatory region 8431 Neighboring gene microRNA 193b Neighboring gene microRNA 365a Neighboring gene long intergenic non-protein coding RNA 2130 Neighboring gene Sharpr-MPRA regulatory region 5329

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.
EBI GWAS Catalog
Genome-wide association study of sexual maturation in males and females highlights a role for body mass and menarche loci in male puberty.
EBI GWAS Catalog
Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
EBI GWAS Catalog

General gene information

Markers

Other Names

  • MIR193B host
  • linc noncoding oxygen-sensitive regulator of sterol homeostasis
  • noncoding oxygen-sensitive regulator of sterol homeostasis

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132983.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AC040173
    Related
    ENST00000641433.1
  2. NR_132984.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC040173
  3. NR_170633.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate splice site resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC040173

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    14301381..14331062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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