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TCF24 transcription factor 24 [ Homo sapiens (human) ]

Gene ID: 100129654, updated on 5-Nov-2017
Official Symbol
TCF24provided by HGNC
Official Full Name
transcription factor 24provided by HGNC
Primary source
HGNC:HGNC:32275
See related
Ensembl:ENSG00000261787 Vega:OTTHUMG00000177282
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TCF-24; bHLHa25
Orthologs
Location:
8q13.1
Exon count:
2
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 8 NC_000008.11 (66946501..66962592, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (67858736..67874825, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene C8orf44-SGK3 readthrough Neighboring gene serum/glucocorticoid regulated kinase family member 3 Neighboring gene pituitary tumor-transforming 3, pseudogene Neighboring gene minichromosome maintenance domain containing 2 Neighboring gene small nucleolar RNA, C/D box 87 Neighboring gene small nucleolar RNA host gene 6 Neighboring gene pre-mRNA processing factor 3 pseudogene Neighboring gene protein phosphatase 1 regulatory subunit 42

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193502.1NP_001180431.1  transcription factor 24

    See identical proteins and their annotated locations for NP_001180431.1

    Status: VALIDATED

    Source sequence(s)
    AC110998, AW028708, CX788264
    Consensus CDS
    CCDS59103.1
    UniProtKB/Swiss-Prot
    Q7RTU0
    Related
    ENSP00000455444.1, OTTHUMP00000256274, ENST00000563496.1, OTTHUMT00000436096
    Conserved Domains (1) summary
    smart00353
    Location:56107
    HLH; helix loop helix domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p7 Primary Assembly

    Range
    66946501..66962592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017012940.1XP_016868429.1  transcription factor 24 isoform X1

    UniProtKB/Swiss-Prot
    Q7RTU0
    Conserved Domains (1) summary
    smart00353
    Location:56107
    HLH; helix loop helix domain

Alternate CHM1_1.1

Genomic

  1. NC_018919.2 Alternate CHM1_1.1

    Range
    67913776..67929869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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