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TEX13C TEX13 family member C [ Homo sapiens (human) ]

Gene ID: 100129520, updated on 12-Oct-2019

Summary

Official Symbol
TEX13Cprovided by HGNC
Official Full Name
TEX13 family member Cprovided by HGNC
Primary source
HGNC:HGNC:52277
See related
Ensembl:ENSG00000282815
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.4) See more
Orthologs

Genomic context

See TEX13C in Genome Data Viewer
Location:
Xq25
Exon count:
2
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (125319871..125325214)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (124453698..124459063)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373331 Neighboring gene teneurin transmembrane protein 1 Neighboring gene ribosomal protein S26 pseudogene 57 Neighboring gene filamin binding LIM protein 1 pseudogene Neighboring gene uncharacterized LOC101928495

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
putative testis-expressed protein 13C
Names
testis expressed sequence 13-like
testis-expressed sequence 13C protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195272.2NP_001182201.1  putative testis-expressed protein 13C

    See identical proteins and their annotated locations for NP_001182201.1

    Status: VALIDATED

    Source sequence(s)
    AL627231
    Consensus CDS
    CCDS83488.1
    UniProtKB/Swiss-Prot
    A0A0J9YWL9
    Related
    ENSP00000488022.1, ENST00000632600.1
    Conserved Domains (3) summary
    smart00547
    Location:959979
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:959978
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam15186
    Location:5148
    TEX13; Testis-expressed sequence 13 protein family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    125319871..125325214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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