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AIDAP3 AIDA pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100128360, updated on 10-Oct-2023

Summary

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Official Symbol
AIDAP3provided by HGNC
Official Full Name
AIDA pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:54665
See related
AllianceGenome:HGNC:54665
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
18p11.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (1927599..1929249, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (2082540..2084190, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (1927600..1929250, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371959 Neighboring gene MPRA-validated peak3042 silencer Neighboring gene uncharacterized LOC105371958 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_47754 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_47822 Neighboring gene NANOG hESC enhancer GRCh37_chr18:1969063-1969621 Neighboring gene uncharacterized LOC105371957 Neighboring gene uncharacterized LOC105371956 Neighboring gene NANOG hESC enhancer GRCh37_chr18:2082631-2083132 Neighboring gene Sharpr-MPRA regulatory region 5248 Neighboring gene MPRA-validated peak3043 silencer Neighboring gene uncharacterized LOC105371961 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr18:2350584-2351783

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030062.2 

    Range
    39..1689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    1927599..1929249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    2082540..2084190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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