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GTF3AP5 general transcription factor IIIA pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 100128217, updated on 4-Mar-2025

Summary

Official Symbol
GTF3AP5provided by HGNC
Official Full Name
general transcription factor IIIA pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:49748
See related
AllianceGenome:HGNC:49748
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See GTF3AP5 in Genome Data Viewer
Location:
7p21.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (14985180..14986125, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (15117909..15118854, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (15024805..15025750, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 26 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:14308213-14308714 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:14308715-14309214 Neighboring gene diacylglycerol kinase beta Neighboring gene MPRA-validated peak6405 silencer Neighboring gene VISTA enhancer hs816 Neighboring gene uncharacterized LOC105375164 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25668 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:14779612-14780128 Neighboring gene uncharacterized LOC124901592 Neighboring gene alkylglycerol monooxygenase Neighboring gene Sharpr-MPRA regulatory region 14752 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:15557538-15558346 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:15586656-15587206 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:15587207-15587755 Neighboring gene uncharacterized LOC124901591

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022529.2 

    Range
    101..1046
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    14985180..14986125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    15117909..15118854 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)