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LOC100121308 transcription factor Sox-9-B [ Nasonia vitripennis (jewel wasp) ]

Gene ID: 100121308, updated on 18-Apr-2026
Gene symbol
LOC100121308
Gene description
transcription factor Sox-9-B
See related
NASONIABASE:NV11920
Gene type
protein coding
RefSeq status
MODEL
Organism
Nasonia vitripennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Altocrustacea; Allotriocarida; Hexapoda; Insecta; Pterygota; Neoptera; Eumetabola; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
Orthologs
all
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See LOC100121308 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Nvit_psr_1.1 (GCF_009193385.2) 3 Unlocalized Scaffold NC_045759.1 (8334271..8343476)
103 previous assembly Nvit_psr_1 (GCF_009193385.1) 3 Unlocalized Scaffold NW_022279627.1 (4793806..4803004, complement)

Chromosome 3 - NC_045759.1Genomic Context describing neighboring genes Neighboring gene 85/88 kDa calcium-independent phospholipase A2 Neighboring gene 85/88 kDa calcium-independent phospholipase A2 Neighboring gene transcription factor SOX-9-like Neighboring gene uncharacterized LOC116416773 Neighboring gene uncharacterized LOC107980457 Neighboring gene microRNA bantam

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
transcription factor Sox-9-B
Names
transcription factor SOX-9

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RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nvit_psr_1.1

Genomic

  1. NC_045759.1 Reference Nvit_psr_1.1

    Range
    8334271..8343476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032598652.1 → XP_032454543.1  transcription factor Sox-9-B isoform X4

    UniProtKB/TrEMBL
    A0A7M7TD00
    Conserved Domains (2) summary
    cd01388
    Location:77 → 147
    SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
    pfam12444
    Location:53 → 74
    Sox_N; Sox developmental protein N terminal

  2. XM_008215211.4 → XP_008213433.1  transcription factor Sox-9-B isoform X2

    UniProtKB/TrEMBL
    A0A7M7H9P6
    Conserved Domains (2) summary
    cd01388
    Location:83 → 153
    SOX-TCF_HMG-box; SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and ...
    pfam12444
    Location:53 → 70
    Sox_N; Sox developmental protein N terminal

  3. XM_016984050.3 → XP_016839539.1  transcription factor Sox-9-B isoform X3

    UniProtKB/TrEMBL
    A0A7M7IPP3

  4. XM_001604863.6 → XP_001604913.2  transcription factor Sox-9-B isoform X1

    UniProtKB/TrEMBL
    A0A7M7G6A4
    Conserved Domains (2) summary
    cd01388
    Location:83 → 153
    SOX-TCF_HMG-box; SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and ...
    pfam12444
    Location:53 → 70
    Sox_N; Sox developmental protein N terminal
Nucleotide Protein Strain
Heading Accession and Version

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