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Ccs copper chaperone for superoxide dismutase [ Nasonia vitripennis (jewel wasp) ]

Gene ID: 100116017, updated on 10-Oct-2024
Gene symbol
Ccs
Gene description
copper chaperone for superoxide dismutase
See related
NASONIABASE:NV14239
Gene type
protein coding
RefSeq status
MODEL
Organism
Nasonia vitripennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
Orthologs
fruit fly honey bee all
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See Ccs in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
104 current Nvit_psr_1.1 (GCF_009193385.2) 3 Unlocalized Scaffold NC_045759.1 (21013407..21018017)
103 previous assembly Nvit_psr_1 (GCF_009193385.1) 3 Unlocalized Scaffold NW_022279634.1 (3742098..3746690, complement)

Chromosome 3 - NC_045759.1Genomic Context describing neighboring genes Neighboring gene odorant receptor 37 Neighboring gene exportin-5-like protein Ranbp21 Neighboring gene UPF0547 protein C16orf87 Neighboring gene uncharacterized LOC100115982 Neighboring gene thioredoxin domain-containing protein 9 Neighboring gene putative protein MSS51 homolog, mitochondrial Neighboring gene RAD51 homolog C Neighboring gene protein asteroid

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
copper chaperone for superoxide dismutase

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RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nvit_psr_1.1

Genomic

  1. NC_045759.1 Reference Nvit_psr_1.1

    Range
    21013407..21018017
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001600532.5 → XP_001600582.1  copper chaperone for superoxide dismutase isoform X2

    UniProtKB/TrEMBL
    A0A7M7G1X0
    Conserved Domains (3) summary
    PLN02957
    Location:7 → 248
    PLN02957; copper, zinc superoxide dismutase
    cd00305
    Location:76 → 222
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...
    cd00371
    Location:7 → 65
    HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...

  2. XM_008205144.4 → XP_008203366.1  copper chaperone for superoxide dismutase isoform X1

    UniProtKB/TrEMBL
    A0A7M7H2S4
    Conserved Domains (3) summary
    PLN02957
    Location:7 → 248
    PLN02957; copper, zinc superoxide dismutase
    cd00305
    Location:76 → 222
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...
    cd00371
    Location:7 → 65
    HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
Nucleotide Protein Strain
Heading Accession and Version

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