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SNORD125 small nucleolar RNA, C/D box 125 [ Homo sapiens (human) ]

Gene ID: 100113380, updated on 13-May-2022

Summary

Official Symbol
SNORD125provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 125provided by HGNC
Primary source
HGNC:HGNC:33564
See related
Ensembl:ENSG00000239127 AllianceGenome:HGNC:33564
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See SNORD125 in Genome Data Viewer
Location:
22q12.2
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (29333163..29333258, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (29796575..29796670, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (29729152..29729247, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene growth arrest specific 2 like 1 Neighboring gene RAS like family 10 member A Neighboring gene adaptor related protein complex 1 subunit beta 1 Neighboring gene ret finger protein like 1 Neighboring gene uncharacterized LOC102723305 Neighboring gene ret finger protein like 4A pseudogene 6

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer.
EBI GWAS Catalog

General gene information

Other Names

  • SNORD125 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003686.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002059
    Related
    ENST00000459538.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    29333163..29333258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    29796575..29796670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)