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TTTY1B testis-specific transcript, Y-linked 1B [ Homo sapiens (human) ]

Gene ID: 100101116, updated on 13-May-2022

Summary

Official Symbol
TTTY1Bprovided by HGNC
Official Full Name
testis-specific transcript, Y-linked 1Bprovided by HGNC
Primary source
HGNC:HGNC:37981
See related
Ensembl:ENSG00000129816 AllianceGenome:HGNC:37981
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTTY1
Expression
Low expression observed in reference dataset See more
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Genomic context

See TTTY1B in Genome Data Viewer
Location:
Yp11.2
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (6390401..6411564)
110 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (6058480..6079643)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (6258442..6279605)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 280 Neighboring gene uncharacterized LOC107987353 Neighboring gene testis-specific transcript, Y-linked 2B Neighboring gene testis-specific transcript, Y-linked 21B Neighboring gene testis-specific transcript, Y-linked 7

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • testis-specific transcript, Y-linked 1B (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003589.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC006335
    Related
    ENST00000250776.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    6390401..6411564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    6058480..6079643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)