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GTF2IP4 general transcription factor IIi pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100093631, updated on 21-Dec-2019

Summary

Official Symbol
GTF2IP4provided by HGNC
Official Full Name
general transcription factor IIi pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:51716
See related
Ensembl:ENSG00000233369
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GTF2I
Expression
Ubiquitous expression in brain (RPKM 129.8), thyroid (RPKM 92.9) and 25 other tissues See more

Genomic context

See GTF2IP4 in Genome Data Viewer
Location:
7q11.23
Exon count:
24
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (73154924..73207296)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (72569012..72621336)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene speedy/RINGO cell cycle regulator family member E9 Neighboring gene PMS1 homolog 2, mismatch repair system component pseudogene 6 Neighboring gene speedy/RINGO cell cycle regulator family member E10, pseudogene Neighboring gene Williams-Beuren syndrome centromeric block B recombination region Neighboring gene prohibitin pseudogene 5 Neighboring gene neutrophil cytosolic factor 1B pseudogene Neighboring gene GTF2I repeat domain containing 2 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • general transcription factor II, i, pseudogene

Clone Names

  • FLJ25021, FLJ25933, FLJ38326

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003580.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA666168, CN368586, CX164639, CX873251, DA067811, DA740051, HY173448
    Related
    ENST00000544802.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    73154924..73207296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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