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IL18RAP interleukin 18 receptor accessory protein [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100084120, updated on 30-Apr-2024

Summary

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Gene symbol
IL18RAP
Gene description
interleukin 18 receptor accessory protein
See related
Ensembl:ENSOANG00000012240
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See IL18RAP in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 2 NC_041729.1 (111384513..111426255, complement)

Chromosome 2 - NC_041729.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 9 member A2 Neighboring gene solute carrier family 9 member A4 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene small nucleolar RNA SNORA7 Neighboring gene interleukin 18 receptor 1 Neighboring gene interleukin 1 receptor like 1 Neighboring gene small nucleolar RNA SNORA7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041729.1 Chromosome 2 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables interleukin-18 receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in interleukin-18-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-18 receptor accessory protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041729.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    111384513..111426255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029050914.1 → XP_028906747.1  interleukin-18 receptor accessory protein isoform X2

    UniProtKB/TrEMBL
    A0A6I8NFQ3
    Related
    ENSOANP00000039541.1, ENSOANT00000064132.1
    Conserved Domains (3) summary
    smart00410
    Location:255 → 347
    IG_like; Immunoglobulin like
    pfam01582
    Location:382 → 511
    TIR; TIR domain
    cl11960
    Location:88 → 142
    Ig; Immunoglobulin domain

  2. XM_039911192.1 → XP_039767126.1  interleukin-18 receptor accessory protein isoform X1

    UniProtKB/TrEMBL
    F7FG48
    Conserved Domains (4) summary
    pfam01582
    Location:428 → 557
    TIR; TIR domain
    pfam18452
    Location:100 → 150
    Ig_6; Immunoglobulin domain
    cd00096
    Location:247 → 250
    Ig; Ig strand A [structural motif]
    cl11960
    Location:247 → 348
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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