U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATF3 activating transcription factor 3 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100075947, updated on 30-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
ATF3
Gene description
activating transcription factor 3
See related
Ensembl:ENSOANG00000040285
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ATF3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 19 NC_041746.1 (11917367..11930496, complement)

Chromosome 19 - NC_041746.1Genomic Context describing neighboring genes Neighboring gene TatD DNase domain containing 3 Neighboring gene spermatogenesis associated 45 Neighboring gene NSL1 component of MIS12 kinetochore complex Neighboring gene basic leucine zipper ATF-like transcription factor 3 Neighboring gene proton activated chloride channel 1 Neighboring gene neudesin neurotrophic factor Neighboring gene protein phosphatase 2 regulatory subunit B'alpha Neighboring gene uncharacterized LOC103171276

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_041746.1 Chromosome 19 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cyclic AMP-dependent transcription factor ATF-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041746.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    11917367..11930496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029047615.2 → XP_028903448.1  cyclic AMP-dependent transcription factor ATF-3

    UniProtKB/TrEMBL
    A0A6I8P1H1
    Related
    ENSOANP00000046902.1
    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.