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CLK2 CDC like kinase 2 [ Equus caballus (horse) ]

Gene ID: 100063546, updated on 8-Mar-2024

Summary

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Official Symbol
CLK2provided by VGNC
Official Full Name
CDC like kinase 2provided by VGNC
Primary source
VGNC:VGNC:16620
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CLK2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (39260997..39270113)
102 previous assembly EquCab2.0 (GCF_000002305.2) 5 NC_009148.2 (42650757..42659892)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene pyruvate kinase L/R Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium channel 3 Neighboring gene secretory carrier membrane protein 3 Neighboring gene endosomal transmembrane epsin interactor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual specificity protein kinase CLK2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    39260997..39270113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005610044.3 → XP_005610101.1  dual specificity protein kinase CLK2 isoform X4

    See identical proteins and their annotated locations for XP_005610101.1

    Conserved Domains (2) summary
    smart00220
    Location:161 → 477
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14215
    Location:148 → 477
    PKc_CLK2; Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2

  2. XM_005610043.3 → XP_005610100.1  dual specificity protein kinase CLK2 isoform X3

    See identical proteins and their annotated locations for XP_005610100.1

    Conserved Domains (1) summary
    cd14215
    Location:149 → 478
    PKc_CLK2; Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2

  3. XM_005610042.3 → XP_005610099.1  dual specificity protein kinase CLK2 isoform X1

    See identical proteins and their annotated locations for XP_005610099.1

    UniProtKB/TrEMBL
    F6YYR1
    Conserved Domains (1) summary
    cd14215
    Location:150 → 479
    PKc_CLK2; Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2

  4. XM_001494729.5 → XP_001494779.2  dual specificity protein kinase CLK2 isoform X2

    See identical proteins and their annotated locations for XP_001494779.2

    Conserved Domains (2) summary
    smart00220
    Location:162 → 478
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14215
    Location:149 → 478
    PKc_CLK2; Catalytic domain of the Dual-specificity protein kinase, CDC-like kinase 2
Nucleotide Protein
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