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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference EquCab3.0 Primary Assembly
Genomic
-
NC_009149.3 Reference EquCab3.0 Primary Assembly
- Range
-
67722353..67762390 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_023643477.1 → XP_023499245.1 histone-lysine N-methyltransferase 2D isoform X5
- UniProtKB/TrEMBL
-
A0A9L0RW12
- Conserved Domains (14) summary
-
- smart00398
Location:2041 → 2092
- HMG; high mobility group
- smart00542
Location:4571 → 4658
- FYRC; FY-rich domain, C-terminal region
- smart00317
Location:4744 → 4866
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
- smart00508
Location:4868 → 4884
- PostSET; Cysteine-rich motif following a subset of SET domains
- cd15509
Location:228 → 273
- PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
- cd15513
Location:1446 → 1492
- PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
- cd15597
Location:1395 → 1445
- PHD3_KMT2D; PHD finger 3 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15601
Location:1523 → 1573
- PHD5_KMT2D; PHD finger 5 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15695
Location:134 → 217
- ePHD1_KMT2D; Extended PHD finger 1 found in histone-lysine N-methyltransferase 2D (KMT2D)
- cd15698
Location:4363 → 4469
- ePHD2_KMT2D; Extended PHD finger 2 found in histone-lysine N-methyltransferase 2D (KMT2D)
- pfam05964
Location:4512 → 4563
- FYRN; F/Y-rich N-terminus
- pfam09606
Location:3306 → 3670
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- cl22851
Location:275 → 320
- PHD_SF; PHD finger superfamily
- cl26464
Location:672 → 1170
- Atrophin-1; Atrophin-1 family
-
XM_023643475.1 → XP_023499243.1 histone-lysine N-methyltransferase 2D isoform X3
- UniProtKB/TrEMBL
- A0A9L0RW12, F6R2B8
- Conserved Domains (14) summary
-
- smart00398
Location:2040 → 2091
- HMG; high mobility group
- smart00542
Location:4593 → 4680
- FYRC; FY-rich domain, C-terminal region
- smart00317
Location:4766 → 4888
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
- smart00508
Location:4890 → 4906
- PostSET; Cysteine-rich motif following a subset of SET domains
- cd15509
Location:228 → 273
- PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
- cd15513
Location:1445 → 1491
- PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
- cd15597
Location:1394 → 1444
- PHD3_KMT2D; PHD finger 3 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15601
Location:1522 → 1572
- PHD5_KMT2D; PHD finger 5 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15695
Location:134 → 217
- ePHD1_KMT2D; Extended PHD finger 1 found in histone-lysine N-methyltransferase 2D (KMT2D)
- cd15698
Location:4385 → 4491
- ePHD2_KMT2D; Extended PHD finger 2 found in histone-lysine N-methyltransferase 2D (KMT2D)
- pfam05964
Location:4534 → 4585
- FYRN; F/Y-rich N-terminus
- pfam09606
Location:3305 → 3669
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- cl22851
Location:275 → 320
- PHD_SF; PHD finger superfamily
- cl26464
Location:672 → 1170
- Atrophin-1; Atrophin-1 family
-
XM_023643476.1 → XP_023499244.1 histone-lysine N-methyltransferase 2D isoform X4
- UniProtKB/TrEMBL
-
A0A9L0RW12
- Conserved Domains (14) summary
-
- smart00398
Location:2034 → 2085
- HMG; high mobility group
- smart00542
Location:4587 → 4674
- FYRC; FY-rich domain, C-terminal region
- smart00317
Location:4760 → 4882
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
- smart00508
Location:4884 → 4900
- PostSET; Cysteine-rich motif following a subset of SET domains
- cd15509
Location:228 → 273
- PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
- cd15513
Location:1446 → 1492
- PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
- cd15597
Location:1395 → 1445
- PHD3_KMT2D; PHD finger 3 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15601
Location:1523 → 1573
- PHD5_KMT2D; PHD finger 5 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15695
Location:134 → 217
- ePHD1_KMT2D; Extended PHD finger 1 found in histone-lysine N-methyltransferase 2D (KMT2D)
- cd15698
Location:4379 → 4485
- ePHD2_KMT2D; Extended PHD finger 2 found in histone-lysine N-methyltransferase 2D (KMT2D)
- pfam05964
Location:4528 → 4579
- FYRN; F/Y-rich N-terminus
- pfam09606
Location:3299 → 3663
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- cl22851
Location:275 → 320
- PHD_SF; PHD finger superfamily
- cl26464
Location:672 → 1170
- Atrophin-1; Atrophin-1 family
-
XM_023643478.1 → XP_023499246.1 histone-lysine N-methyltransferase 2D isoform X6
- UniProtKB/TrEMBL
-
A0A9L0RW12
- Conserved Domains (14) summary
-
- smart00398
Location:2041 → 2092
- HMG; high mobility group
- smart00542
Location:4563 → 4650
- FYRC; FY-rich domain, C-terminal region
- smart00317
Location:4736 → 4858
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
- smart00508
Location:4860 → 4876
- PostSET; Cysteine-rich motif following a subset of SET domains
- cd15509
Location:228 → 273
- PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
- cd15513
Location:1446 → 1492
- PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
- cd15597
Location:1395 → 1445
- PHD3_KMT2D; PHD finger 3 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15601
Location:1523 → 1573
- PHD5_KMT2D; PHD finger 5 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15695
Location:134 → 217
- ePHD1_KMT2D; Extended PHD finger 1 found in histone-lysine N-methyltransferase 2D (KMT2D)
- cd15698
Location:4355 → 4461
- ePHD2_KMT2D; Extended PHD finger 2 found in histone-lysine N-methyltransferase 2D (KMT2D)
- pfam05964
Location:4504 → 4555
- FYRN; F/Y-rich N-terminus
- pfam09606
Location:3275 → 3639
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- cl22851
Location:275 → 320
- PHD_SF; PHD finger superfamily
- cl26464
Location:672 → 1170
- Atrophin-1; Atrophin-1 family
-
XM_023643479.1 → XP_023499247.1 histone-lysine N-methyltransferase 2D isoform X7
- UniProtKB/TrEMBL
-
A0A9L0RW12
- Conserved Domains (14) summary
-
- smart00398
Location:2041 → 2092
- HMG; high mobility group
- smart00542
Location:4531 → 4618
- FYRC; FY-rich domain, C-terminal region
- smart00317
Location:4704 → 4826
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
- smart00508
Location:4828 → 4844
- PostSET; Cysteine-rich motif following a subset of SET domains
- cd15509
Location:228 → 273
- PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
- cd15513
Location:1446 → 1492
- PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
- cd15597
Location:1395 → 1445
- PHD3_KMT2D; PHD finger 3 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15601
Location:1523 → 1573
- PHD5_KMT2D; PHD finger 5 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15695
Location:134 → 217
- ePHD1_KMT2D; Extended PHD finger 1 found in histone-lysine N-methyltransferase 2D (KMT2D)
- cd15698
Location:4323 → 4429
- ePHD2_KMT2D; Extended PHD finger 2 found in histone-lysine N-methyltransferase 2D (KMT2D)
- pfam05964
Location:4472 → 4523
- FYRN; F/Y-rich N-terminus
- pfam09606
Location:3306 → 3670
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- cl22851
Location:275 → 320
- PHD_SF; PHD finger superfamily
- cl26464
Location:672 → 1170
- Atrophin-1; Atrophin-1 family
-
XM_023643474.1 → XP_023499242.1 histone-lysine N-methyltransferase 2D isoform X2
- UniProtKB/TrEMBL
-
A0A9L0RW12
- Conserved Domains (14) summary
-
- smart00398
Location:2041 → 2092
- HMG; high mobility group
- smart00542
Location:4594 → 4681
- FYRC; FY-rich domain, C-terminal region
- smart00317
Location:4767 → 4889
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
- smart00508
Location:4891 → 4907
- PostSET; Cysteine-rich motif following a subset of SET domains
- cd15509
Location:228 → 273
- PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
- cd15513
Location:1446 → 1492
- PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
- cd15597
Location:1395 → 1445
- PHD3_KMT2D; PHD finger 3 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15601
Location:1523 → 1573
- PHD5_KMT2D; PHD finger 5 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15695
Location:134 → 217
- ePHD1_KMT2D; Extended PHD finger 1 found in histone-lysine N-methyltransferase 2D (KMT2D)
- cd15698
Location:4386 → 4492
- ePHD2_KMT2D; Extended PHD finger 2 found in histone-lysine N-methyltransferase 2D (KMT2D)
- pfam05964
Location:4535 → 4586
- FYRN; F/Y-rich N-terminus
- pfam09606
Location:3306 → 3670
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- cl22851
Location:275 → 320
- PHD_SF; PHD finger superfamily
- cl26464
Location:672 → 1170
- Atrophin-1; Atrophin-1 family
-
XM_005611139.3 → XP_005611196.2 histone-lysine N-methyltransferase 2D isoform X1
- UniProtKB/TrEMBL
-
A0A9L0RW12
- Related
- ENSECAP00000066791.1, ENSECAT00000090281.1
- Conserved Domains (14) summary
-
- smart00398
Location:2038 → 2089
- HMG; high mobility group
- smart00542
Location:5264 → 5351
- FYRC; FY-rich domain, C-terminal region
- smart00317
Location:5421 → 5543
- SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
- smart00508
Location:5545 → 5561
- PostSET; Cysteine-rich motif following a subset of SET domains
- cd15509
Location:228 → 273
- PHD1_KMT2C_like; PHD finger 1 found in Histone-lysine N-methyltransferase 2C (KMT2C) and 2D (KMT2D)
- cd15513
Location:1446 → 1492
- PHD5_KMT2C_like; PHD finger 5 found in Histone-lysine N-methyltransferase 2C (KMT2C) and PHD finger 4 found in KMT2D
- cd15597
Location:1395 → 1445
- PHD3_KMT2D; PHD finger 3 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15601
Location:1523 → 1573
- PHD5_KMT2D; PHD finger 5 found in Histone-lysine N-methyltransferase 2D (KMT2D)
- cd15695
Location:134 → 217
- ePHD1_KMT2D; Extended PHD finger 1 found in histone-lysine N-methyltransferase 2D (KMT2D)
- cd15698
Location:5056 → 5162
- ePHD2_KMT2D; Extended PHD finger 2 found in histone-lysine N-methyltransferase 2D (KMT2D)
- pfam05964
Location:5205 → 5256
- FYRN; F/Y-rich N-terminus
- pfam09606
Location:4019 → 4340
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- cl22851
Location:275 → 320
- PHD_SF; PHD finger superfamily
- cl26464
Location:672 → 1170
- Atrophin-1; Atrophin-1 family