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GATA2 GATA binding protein 2 [ Equus caballus (horse) ]

Gene ID: 100049949, updated on 8-Aug-2025
Official Symbol
GATA2provided by VGNC
Official Full Name
GATA binding protein 2provided by VGNC
Primary source
VGNC:VGNC:18255
See related
Ensembl:ENSECAG00000016768
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
all
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Try the new Transcripts and proteins table
See GATA2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_12 current TB-T2T (GCF_041296265.1) 16 NC_091699.1 (12265507..12279470, complement)
RS_2024_08 previous assembly EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (2560637..2570044, complement)

Chromosome 16 - NC_091699.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111768284 Neighboring gene DnaJ heat shock protein family (Hsp40) member B8 Neighboring gene uncharacterized LOC102149826 Neighboring gene ribophorin I Neighboring gene uncharacterized LOC138918004

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Thoroughbred Stallion gene expression
  • BioProject: PRJEB53382
  • Analysis date: Mon Jan 06 09:53:19 2025

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of miRNA transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
endothelial transcription factor GATA-2

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RefSeqs of Annotated Genomes: GCF_041296265.1-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TB-T2T Primary Assembly

Genomic

  1. NC_091699.1 Reference TB-T2T Primary Assembly

    Range
    12265507..12279470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_070237155.1 → XP_070093256.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96

  2. XM_070237154.1 → XP_070093255.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96

  3. XM_070237153.1 → XP_070093254.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96

  4. XM_070237152.1 → XP_070093253.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96

  5. XM_070237147.1 → XP_070093248.1  endothelial transcription factor GATA-2 isoform X3

  6. XM_070237146.1 → XP_070093247.1  endothelial transcription factor GATA-2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2IAT8

  7. XM_014731374.3 → XP_014586860.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96
    Related
    ENSECAP00000032868.3
    Conserved Domains (2) summary
    COG5641
    Location:214 → 373
    GAT1; GATA Zn-finger-containing transcription factor [Transcription]
    cd00202
    Location:349 → 398
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

  8. XM_070237145.1 → XP_070093246.1  endothelial transcription factor GATA-2 isoform X1

  9. XM_070237150.1 → XP_070093251.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96

  10. XM_070237151.1 → XP_070093252.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96

  11. XM_070237149.1 → XP_070093250.1  endothelial transcription factor GATA-2 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L499, A0A9L0TE96

  12. XM_070237148.1 → XP_070093249.1  endothelial transcription factor GATA-2 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2GTF6, A0A9L0TE96
Nucleotide Protein
Heading Accession and Version

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