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RBP4 retinol binding protein 4 [ Equus caballus (horse) ]

Gene ID: 100049790, updated on 20-Feb-2025

Summary

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Official Symbol
RBP4provided by VGNC
Official Full Name
retinol binding protein 4provided by VGNC
Primary source
VGNC:VGNC:49533
See related
Ensembl:ENSECAG00000034419
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
RBP; PRBP
Orthologs
human mouse all
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Genomic context

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See RBP4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_12 current TB-T2T (GCF_041296265.1) 1 NC_091684.1 (36308283..36318939)
RS_2024_08 previous assembly EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (35661608..35670556)

Chromosome 1 - NC_091684.1Genomic Context describing neighboring genes Neighboring gene FRA10A associated CGG repeat 1 Neighboring gene phosphodiesterase 6C Neighboring gene uncharacterized LOC138923348 Neighboring gene free fatty acid receptor 4 Neighboring gene centrosomal protein 55 Neighboring gene uncharacterized LOC138923371

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Thoroughbred Stallion gene expression
  • BioProject: PRJEB53382
  • Analysis date: Mon Jan 06 09:53:19 2025

Bibliography

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Related articles in PubMed

  1. Changes in equine endometrial retinol-binding protein RNA during the estrous cycle and early pregnancy and with exogenous steroids. McDowell KJ, et al. Biol Reprod, 1995 Feb. PMID 7536053
  2. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables retinol transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retinol transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinol-binding protein 4
Names
plasma retinol-binding protein
retinol binding protein 4, plasma

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081951.2 → NP_001075420.2  retinol-binding protein 4 precursor

    Status: VALIDATED

    Source sequence(s)
    PJAA01000002
    UniProtKB/Swiss-Prot
    Q28369
    UniProtKB/TrEMBL
    A0A3Q2I1Q0

RefSeqs of Annotated Genomes: GCF_041296265.1-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TB-T2T Primary Assembly

Genomic

  1. NC_091684.1 Reference TB-T2T Primary Assembly

    Range
    36308283..36318939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023655349.2 → XP_023511117.2  retinol-binding protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HDF1, F6W135
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q28369.1 GenPept UniProtKB/Swiss-Prot:Q28369

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials