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9030622O22Rik RIKEN cDNA 9030622O22 gene [ Mus musculus (house mouse) ]

Gene ID: 100043820, updated on 19-Jul-2022

Summary

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Official Symbol
9030622O22Rikprovided by MGI
Official Full Name
RIKEN cDNA 9030622O22 geneprovided by MGI
Primary source
MGI:MGI:1918820
See related
Ensembl:ENSMUSG00000086141 AllianceGenome:MGI:1918820
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Alien; Falcor
Summary
Is expressed in floor plate; foregut; heart; liver; and lung. Orthologous to human LINC00261 (long intergenic non-protein coding RNA 261). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See 9030622O22Rik in Genome Data Viewer
Location:
2; 2 G3
Exon count:
26
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (147786379..147882433, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (147944459..148040513, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 35528 Neighboring gene predicted gene, 35579 Neighboring gene predicted gene, 46769 Neighboring gene forkhead box A2 Neighboring gene cofilin 1, non-muscle pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Differential chamber-specific expression and regulation of long non-coding RNAs during cardiac development. García-Padilla C, et al. Biochim Biophys Acta Gene Regul Mech, 2019 Oct. PMID 31678627
  2. The long noncoding RNA Falcor regulates Foxa2 expression to maintain lung epithelial homeostasis and promote regeneration. Swarr DT, et al. Genes Dev, 2019 Jun 1. PMID 30923168, Free PMC Article
  3. Identification of novel long noncoding RNAs underlying vertebrate cardiovascular development. Kurian L, et al. Circulation, 2015 Apr 7. PMID 25739401, Free PMC Article
  4. Long noncoding RNAs are spatially correlated with transcription factors and regulate lung development. Herriges MJ, et al. Genes Dev, 2014 Jun 15. PMID 24939938, Free PMC Article
  5. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    147786379..147882433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_866820.3 RNA Sequence

  2. XR_375083.4 RNA Sequence

  3. XR_375087.4 RNA Sequence

  4. XR_003953942.1 RNA Sequence

  5. XR_866835.3 RNA Sequence

  6. XR_375089.4 RNA Sequence

  7. XR_866819.3 RNA Sequence

  8. XR_866836.3 RNA Sequence

  9. XR_866822.3 RNA Sequence

  10. XR_866815.3 RNA Sequence

  11. XR_375084.4 RNA Sequence

  12. XR_866834.3 RNA Sequence

  13. XR_866829.3 RNA Sequence

  14. XR_003953943.1 RNA Sequence

  15. XR_003953944.1 RNA Sequence

    Related
    ENSMUST00000136555.9

  16. XR_866833.3 RNA Sequence

  17. XR_866817.3 RNA Sequence

  18. XR_866814.3 RNA Sequence

  19. XR_001783502.2 RNA Sequence

  20. XR_866830.3 RNA Sequence

  21. XR_866824.3 RNA Sequence

  22. XR_866812.3 RNA Sequence

  23. XR_866826.3 RNA Sequence

  24. XR_866816.3 RNA Sequence

    Related
    ENSMUST00000246457.1

  25. XR_866813.3 RNA Sequence

  26. XR_866831.3 RNA Sequence

  27. XR_866818.3 RNA Sequence

  28. XR_375090.3 RNA Sequence

  29. XR_866821.2 RNA Sequence

  30. XR_866832.1 RNA Sequence

  31. XR_866828.2 RNA Sequence

  32. XR_866825.1 RNA Sequence

  33. XR_866827.1 RNA Sequence

  34. XR_866823.1 RNA Sequence

  35. XR_866838.3 RNA Sequence

  36. XR_375076.4 RNA Sequence

  37. XR_375075.4 RNA Sequence

  38. XR_866811.3 RNA Sequence

  39. XR_866837.3 RNA Sequence

  40. XR_375082.4 RNA Sequence

  41. XR_003953945.1 RNA Sequence

  42. XR_866839.2 RNA Sequence

Nucleotide Protein Strain
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