U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100043315 uncharacterized LOC100043315 [ Mus musculus (house mouse) ]

Gene ID: 100043315, updated on 8-Feb-2024

Summary

Gene symbol
LOC100043315
Gene description
uncharacterized LOC100043315
See related
Ensembl:ENSMUSG00000100603
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
15; 15 E3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (94995503..95047199, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (95097622..95149318, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 117 Neighboring gene predicted gene, 30953 Neighboring gene predicted gene, 30810 Neighboring gene STARR-seq mESC enhancer starr_39563 Neighboring gene predicted gene, 31075 Neighboring gene NEL-like 2 Neighboring gene STARR-seq mESC enhancer starr_39564 Neighboring gene predicted gene, 31370

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015482.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    BC127134
    Related
    ENSMUST00000185302.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    94995503..95047199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)