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Gm15500 predicted pseudogene 15500 [ Mus musculus (house mouse) ]

Gene ID: 100043295, updated on 28-Oct-2024

Summary

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Official Symbol
Gm15500provided by MGI
Official Full Name
predicted pseudogene 15500provided by MGI
Primary source
MGI:MGI:3782947
See related
Ensembl:ENSMUSG00000086583 AllianceGenome:MGI:3782947
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Annotation information
Note: In NCBI's Build 37.2 annotation of the reference assembly, NCBI incorrectly annotated Rpl5 as GeneID:19983 at this location on chromosome 7. It has now been determined that Rpl5 is a multi-exon functional gene on chromosome 5, and it is now represented by GeneID:100503670. This chromosome 7 location represents an intronless Rpl5 pseudogene, as defined by GeneID:100043295. [17 Jun 2014]
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Genomic context

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See Gm15500 in Genome Data Viewer
Location:
7 F1; 7 60.17 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (114304451..114305469, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (114705216..114706234, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_19933 Neighboring gene calcitonin/calcitonin-related polypeptide, alpha Neighboring gene Rho GTPase activating protein 21 pseudogene Neighboring gene calcitonin-related polypeptide, beta Neighboring gene STARR-seq mESC enhancer starr_19935 Neighboring gene STARR-seq mESC enhancer starr_19936 Neighboring gene INSC spindle orientation adaptor protein Neighboring gene STARR-seq mESC enhancer starr_19937 Neighboring gene predicted gene, 24982

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • ribosomal protein L5 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_028073.1 

    Range
    101..1119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    114304451..114305469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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