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Mir22hg Mir22 host gene (non-protein coding) [ Mus musculus (house mouse) ]

Gene ID: 100042498, updated on 12-May-2024

Summary

Official Symbol
Mir22hgprovided by MGI
Official Full Name
Mir22 host gene (non-protein coding)provided by MGI
Primary source
MGI:MGI:1914348
See related
Ensembl:ENSMUSG00000085148 AllianceGenome:MGI:1914348
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mir-22; 2210403K04Rik
Summary
Acts upstream of or within response to wounding. Orthologous to human MIR22HG (MIR22 host gene). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in bladder adult (RPKM 25.8), placenta adult (RPKM 10.6) and 28 other tissues See more
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Genomic context

See Mir22hg in Genome Data Viewer
Location:
11 B5; 11 45.91 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (75352365..75357516)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (75461539..75466690)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene serine (or cysteine) peptidase inhibitor, clade F, member 2 Neighboring gene predicted gene, 35391 Neighboring gene WD repeat domain 81 Neighboring gene STARR-positive B cell enhancer ABC_E3973 Neighboring gene STARR-positive B cell enhancer ABC_E10687 Neighboring gene STARR-seq mESC enhancer starr_29995 Neighboring gene microRNA 22 Neighboring gene TLC domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E591 Neighboring gene pre-mRNA processing factor 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (1)  1 citation

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_030711.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL591496
    Related
    ENSMUST00000149940.2
  2. NR_190554.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL591496
  3. NR_190555.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL591496
  4. NR_190556.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL591496

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    75352365..75357516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)