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Rpl35rt ribosomal protein L35, retrotransposed [ Mus musculus (house mouse) ]

Gene ID: 100038991, updated on 8-Mar-2025

Summary

Official Symbol
Rpl35rtprovided by MGI
Official Full Name
ribosomal protein L35, retrotransposedprovided by MGI
Primary source
MGI:MGI:3780170
See related
Ensembl:ENSMUSG00000078193 AllianceGenome:MGI:3780170
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm2000
Summary
Predicted to enable ribonucleoprotein complex binding activity. Predicted to be a structural constituent of ribosome. Predicted to be located in cytosolic ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 19. Orthologous to human RPL35 (ribosomal protein L35). [provided by Alliance of Genome Resources, Mar 2025]
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Genomic context

See Rpl35rt in Genome Data Viewer
Location:
1 G3; 1 67.71 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (156193610..156194054)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (156366040..156366484)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158194711-158194894 Neighboring gene STARR-seq mESC enhancer starr_02735 Neighboring gene tudor domain containing 5 Neighboring gene nephrosis 2, podocin Neighboring gene axonemal dynein light chain domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_02736 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158338195-158338508 Neighboring gene STARR-positive B cell enhancer ABC_E3317 Neighboring gene STARR-positive B cell enhancer ABC_E9485 Neighboring gene sterol O-acyltransferase 1 Neighboring gene STARR-positive B cell enhancer ABC_E2571 Neighboring gene STARR-positive B cell enhancer mm9_chr1:158404407-158404707 Neighboring gene predicted gene, 39682

Genomic regions, transcripts, and products

General gene information

Other Names

  • ribosomal protein L35 pseudogene

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables ribonucleoprotein complex binding ISO
Inferred from Sequence Orthology
more info
 
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
located_in cytosolic ribosome ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030643.1 

    Range
    101..545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    156193610..156194054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)