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Gm10516 predicted gene 10516 [ Mus musculus (house mouse) ]

Gene ID: 100038712, updated on 8-Feb-2024

Summary

Official Symbol
Gm10516provided by MGI
Official Full Name
predicted gene 10516provided by MGI
Primary source
MGI:MGI:3641979
See related
Ensembl:ENSMUSG00000097316 AllianceGenome:MGI:3641979
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in cerebellum adult (RPKM 2.2), limb E14.5 (RPKM 2.0) and 27 other tissues See more
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Genomic context

See Gm10516 in Genome Data Viewer
Location:
1 H6; 1 97.27 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (191821198..191835322)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (192136898..192151025)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene microRNA 3473c Neighboring gene TNF receptor-associated factor 5 Neighboring gene STARR-positive B cell enhancer ABC_E11114 Neighboring gene STARR-positive B cell enhancer ABC_E11115 Neighboring gene glutathione S-transferase, pi, pseudogene Neighboring gene REST corepressor 3 Neighboring gene predicted gene, 39745 Neighboring gene potassium voltage-gated channel, subfamily H (eag-related), member 1 Neighboring gene STARR-seq mESC enhancer starr_03453 Neighboring gene STARR-seq mESC enhancer starr_03454 Neighboring gene STARR-seq mESC enhancer starr_03455 Neighboring gene STARR-seq mESC enhancer starr_03457 Neighboring gene STARR-seq mESC enhancer starr_03458

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033536.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK142593
    Related
    ENSMUST00000180598.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    191821198..191835322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)