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Gm10433 predicted gene 10433 [ Mus musculus (house mouse) ]

Gene ID: 100038378, updated on 8-Feb-2024

Summary

Official Symbol
Gm10433provided by MGI
Official Full Name
predicted gene 10433provided by MGI
Primary source
MGI:MGI:3642010
See related
Ensembl:ENSMUSG00000072884 AllianceGenome:MGI:3642010
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See Gm10433 in Genome Data Viewer
Location:
12 E; 12 50.43 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (100154227..100159797)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (100187968..100193538)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11523 Neighboring gene nrde-2 necessary for RNA interference, domain containing Neighboring gene STARR-positive B cell enhancer ABC_E5350 Neighboring gene STARR-seq mESC enhancer starr_33033 Neighboring gene predicted gene, 36263 Neighboring gene STARR-positive B cell enhancer ABC_E10772 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:101425780-101425963 Neighboring gene calmodulin 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:101466777-101466886 Neighboring gene STARR-seq mESC enhancer starr_33040 Neighboring gene predicted gene, 40557

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045282.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK141725
    Related
    ENSMUST00000146364.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    100154227..100159797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)