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mcl1 MCL1, BCL2 family apoptosis regulator [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100038211, updated on 8-Mar-2024

Summary

Official Symbol
mcl1provided by Xenbase
Official Full Name
MCL1, BCL2 family apoptosis regulatorprovided by Xenbase
Primary source
Xenbase:XB-GENE-487620
See related
Ensembl:ENSXETG00000008910
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
eat; mcl-1; mcl1l; mcl1s; bcl2l3
Orthologs
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Genomic context

See mcl1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (127210198..127215475)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (106581118..106586397)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene one cut homeobox 1, gene 2 Neighboring gene endosulfine alpha Neighboring gene uncharacterized LOC116407076 Neighboring gene ADAMTS like 4

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein heterodimerization activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein homodimerization activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in extrinsic apoptotic signaling pathway in absence of ligand IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intrinsic apoptotic signaling pathway in response to DNA damage IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrial fusion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
involved_in release of cytochrome c from mitochondria IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrial outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
induced myeloid leukemia cell differentiation protein Mcl-1
Names
myeloid cell leukemia 1
myeloid cell leukemia sequence 1 (BCL2-related)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    127210198..127215475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935466.5XP_002935512.1  induced myeloid leukemia cell differentiation protein Mcl-1

    UniProtKB/TrEMBL
    A0A6I8PM94
    Related
    ENSXETP00000056124.2, ENSXETT00000056124.4
    Conserved Domains (1) summary
    cd06845
    Location:106251
    Bcl-2_like; Apoptosis regulator proteins of the Bcl-2 family, named after B-cell lymphoma 2. This alignment model spans what have been described as Bcl-2 homology regions BH1, BH2, BH3, and BH4. Many members of this family have an additional C-terminal transmembrane ...