Format

Send to:

Choose Destination

sp3.S Sp3 transcription factor S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100037013, updated on 8-Apr-2017

Summary

Official Symbol
sp3.S
Official Full Name
Sp3 transcription factor S homeolog
Primary source
Xenbase:XB-GENE-977162
Locus tag
XELAEV_18047179mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
sp3; spr2

Genomic context

See sp3.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (60813105..60833184, complement)

Chromosome 9_10S - NC_030741.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase MLT-like Neighboring gene uncharacterized LOC108702998 Neighboring gene cell division cycle associated 7 S homeolog Neighboring gene obg-like ATPase 1 Neighboring gene Sp9 transcription factor S homeolog

Genomic regions, transcripts, and products

Genomic Sequence:
NC_030741.1 Chromosome 9_10S Reference Xenopus_laevis_v2 Primary Assembly

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
Sp3 transcription factor S homeolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001128624.1NP_001122096.1  Sp3 transcription factor S homeolog

    See identical proteins and their annotated locations for NP_001122096.1

    Status: PROVISIONAL

    Source sequence(s)
    BC167502
    UniProtKB/TrEMBL
    B3DLM3
    Conserved Domains (4) summary
    COG5048
    Location:580662
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567589
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:625647
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:611634
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030741.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    60813105..60833184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center