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dao D-amino-acid oxidase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100036595, updated on 8-Mar-2024

Summary

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Official Symbol
daoprovided by Xenbase
Official Full Name
D-amino-acid oxidaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-976198
See related
Ensembl:ENSXETG00000022308
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
daao; oxda; damox
Orthologs
human mouse all
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Genomic context

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See dao in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (146507012..146539159)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (138043538..138061033)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene coronin 1C Neighboring gene slingshot protein phosphatase 1 Neighboring gene SV2 related protein Neighboring gene ubiquitin specific peptidase 30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables D-amino-acid oxidase activity IEA
Inferred from Electronic Annotation
more info
  
enables FAD binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within D-amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within D-amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
D-amino-acid oxidase
NP_001090631.1
XP_031746050.1
XP_031748881.1
XP_031750971.1
XP_031751328.1
XP_031754243.1
XP_031756833.1
XP_031759409.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097162.1 → NP_001090631.1  D-amino-acid oxidase

    See identical proteins and their annotated locations for NP_001090631.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080368
    UniProtKB/TrEMBL
    A0A6I8QCS8, F6U377, Q0VGX5
    Related
    ENSXETP00000070526.2, ENSXETT00000068781.2
    Conserved Domains (1) summary
    pfam01266
    Location:2 → 329
    DAO; FAD dependent oxidoreductase

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    146507012..146539159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031890190.1 → XP_031746050.1  D-amino-acid oxidase isoform X2

    UniProtKB/TrEMBL
    A0A6I8QCS8, F6U377, Q0VGX5
    Related
    ENSXETP00000071723.1, ENSXETT00000095426.2
    Conserved Domains (1) summary
    pfam01266
    Location:2 → 329
    DAO; FAD dependent oxidoreductase

  2. XM_031895468.1 → XP_031751328.1  D-amino-acid oxidase isoform X2

    UniProtKB/TrEMBL
    A0A6I8QCS8, F6U377, Q0VGX5
    Conserved Domains (1) summary
    pfam01266
    Location:2 → 329
    DAO; FAD dependent oxidoreductase

  3. XM_031900973.1 → XP_031756833.1  D-amino-acid oxidase isoform X2

    UniProtKB/TrEMBL
    A0A6I8QCS8, F6U377, Q0VGX5
    Conserved Domains (1) summary
    pfam01266
    Location:2 → 329
    DAO; FAD dependent oxidoreductase

  4. XM_031903549.1 → XP_031759409.1  D-amino-acid oxidase isoform X2

    UniProtKB/TrEMBL
    A0A6I8QCS8, F6U377, Q0VGX5
    Conserved Domains (1) summary
    pfam01266
    Location:2 → 329
    DAO; FAD dependent oxidoreductase

  5. XM_031893021.1 → XP_031748881.1  D-amino-acid oxidase isoform X2

    UniProtKB/TrEMBL
    A0A6I8QCS8, F6U377, Q0VGX5
    Conserved Domains (1) summary
    pfam01266
    Location:2 → 329
    DAO; FAD dependent oxidoreductase

  6. XM_031898383.1 → XP_031754243.1  D-amino-acid oxidase isoform X1

    UniProtKB/TrEMBL
    A0A6I8QCS8, A0A6I8QWG7
    Related
    ENSXETP00000073519.2, ENSXETT00000081355.2
    Conserved Domains (1) summary
    pfam01266
    Location:23 → 350
    DAO; FAD dependent oxidoreductase

  7. XM_031895111.1 → XP_031750971.1  D-amino-acid oxidase isoform X2

    UniProtKB/TrEMBL
    A0A6I8QCS8, F6U377, Q0VGX5
    Conserved Domains (1) summary
    pfam01266
    Location:2 → 329
    DAO; FAD dependent oxidoreductase
Nucleotide Protein Strain
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