LOC100034175 alcohol dehydrogenase-S-isoenzyme [Equus caballus (horse)] - Gene

Summary

Gene symbol: LOC100034175
Gene description: alcohol dehydrogenase-S-isoenzyme
See related: Ensembl:ENSECAG00000019267
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Equus caballus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
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Genomic context

Location:: chromosome: 3

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_12	current	TB-T2T (GCF_041296265.1)	3	NC_091686.1 (45944681..45960181)
RS_2024_08	previous assembly	EquCab3.0 (GCF_002863925.1)	3	NC_009146.3 (40828623..40844123, complement)

Chromosome 3 - NC_091686.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Thoroughbred Stallion gene expression
BioProject: PRJEB53382
Analysis date: Mon Jan 06 09:53:19 2025

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH94448 (e-PCR)
- UniSTS:119696

ADH1B (e-PCR)
- UniSTS:503452

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables all-trans-retinol dehydrogenase (NAD+) activity	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in retinoic acid metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in retinol metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: alcohol dehydrogenase S chain

NP_001075414.1

EC 1.1.1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001081945.2 → NP_001075414.1 alcohol dehydrogenase S chain

See identical proteins and their annotated locations for NP_001075414.1

Status: VALIDATED

Source sequence(s)

JBFNWK010000003

UniProtKB/Swiss-Prot

P00328

UniProtKB/TrEMBL

A0A9L0SIF1

Related

ENSECAP00000032068.2, ENSECAT00000040465.3

Conserved Domains (2) summary

cd08299
Location:3 → 374

alcohol_DH_class_I_II_IV; class I, II, IV alcohol dehydrogenases

COG1062
Location:8 → 374

FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]