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mir130c-2 microRNA 130c-2 [ Danio rerio (zebrafish) ]

Gene ID: 100033649, updated on 12-Sep-2024

Summary

Official Symbol
mir130c-2provided by ZNC
Official Full Name
microRNA 130c-2provided by ZNC
Primary source
ZFIN:ZDB-MIRNAG-090929-136
See related
Ensembl:ENSDARG00000083224 miRBase:MI0001988; AllianceGenome:ZFIN:ZDB-MIRNAG-090929-136
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
dre-mir-130c-2
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See mir130c-2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (13288828..13288908)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (12788611..12788691)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1F Neighboring gene DNA topoisomerase III beta Neighboring gene interleukin-17F-like Neighboring gene microRNA 301b Neighboring gene microRNA 454b

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_030079.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    BX957246
    Related
    ENSDART00000115616.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    13288828..13288908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)