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COL3A1 collagen type III alpha 1 chain [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100028423, updated on 8-May-2024

Summary

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Gene symbol
COL3A1
Gene description
collagen type III alpha 1 chain
See related
EnsemblRapid:ENSMODG00000010811
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See COL3A1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
51
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 4 NC_077230.1 (206233635..206296622)
103 previous assembly MonDom5 (GCF_000002295.2) 4 NC_008804.1 (205621617..205684306)

Chromosome 4 - NC_077230.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130453736 Neighboring gene cofilin-2-like Neighboring gene collagen type V alpha 2 chain Neighboring gene WD repeat domain 75

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-1(III) chain
Names
collagen, type III, alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077230.1 Reference mMonDom1.pri

    Range
    206233635..206296622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001378421.5 → XP_001378458.3  collagen alpha-1(III) chain

    Related
    ENSMODP00000013550.4, ENSMODT00000013799.4
Nucleotide Protein
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