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LOC100022757 transcription factor SOX-17-like [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100022757, updated on 8-May-2024
Gene symbol
LOC100022757
Gene description
transcription factor SOX-17-like
See related
EnsemblRapid:ENSMODG00000024927
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Try the new Gene page
Try the new Transcripts and proteins table
See LOC100022757 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (301651065..301665418)
103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (186009130..186023441, complement)

Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene actin, cytoplasmic 2-like Neighboring gene SRY-box transcription factor 17 Neighboring gene RP1 axonemal microtubule associated Neighboring gene lipoxygenase homology domain-containing protein 1-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vasculogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
transcription factor SOX-17-like

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077229.1 Reference mMonDom1.pri

    Range
    301651065..301665418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001368588.4 → XP_001368625.2  transcription factor SOX-17-like

    Related
    ENSMODP00000036257.3, ENSMODT00000037847.3
Nucleotide Protein
Heading Accession and Version

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