U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BAZ1B bromodomain adjacent to zinc finger domain 1B [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100018453, updated on 8-May-2024

Summary

Gene symbol
BAZ1B
Gene description
bromodomain adjacent to zinc finger domain 1B
See related
EnsemblRapid:ENSMODG00000013761
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See BAZ1B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (522416249..522480858)
103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (529931840..529995731, complement)

Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene transducin beta like 2 Neighboring gene BAF chromatin remodeling complex subunit BCL7B Neighboring gene frizzled class receptor 9 Neighboring gene uncharacterized LOC130457554

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H2AXY142 kinase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of WICH complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
tyrosine-protein kinase BAZ1B

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077228.1 Reference mMonDom1.pri

    Range
    522416249..522480858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007486005.3XP_007486067.1  tyrosine-protein kinase BAZ1B isoform X2

    Conserved Domains (7) summary
    smart00571
    Location:599663
    DDT; domain in different transcription and chromosome remodeling factors
    cd15628
    Location:11821227
    PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
    pfam10537
    Location:21120
    WAC_Acf1_DNA_bd; ATP-utilizing chromatin assembly and remodelling N-terminal
    pfam15612
    Location:720763
    WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    pfam15613
    Location:895932
    WHIM2; WSTF, HB1, Itc1p, MBD9 motif 2
    pfam15614
    Location:9871025
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
    cl02556
    Location:13391435
    Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
  2. XM_001366710.4XP_001366747.1  tyrosine-protein kinase BAZ1B isoform X1

    UniProtKB/TrEMBL
    F6UBA4
    Related
    ENSMODP00000017203.3, ENSMODT00000017522.6
    Conserved Domains (7) summary
    smart00571
    Location:605669
    DDT; domain in different transcription and chromosome remodeling factors
    cd15628
    Location:11881233
    PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
    pfam10537
    Location:21120
    WAC_Acf1_DNA_bd; ATP-utilizing chromatin assembly and remodelling N-terminal
    pfam15612
    Location:726769
    WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    pfam15613
    Location:901938
    WHIM2; WSTF, HB1, Itc1p, MBD9 motif 2
    pfam15614
    Location:9931031
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
    cl02556
    Location:13451441
    Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.