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POMT1 protein O-mannosyltransferase 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100016377, updated on 8-Mar-2024

Summary

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Gene symbol
POMT1
Gene description
protein O-mannosyltransferase 1
See related
Ensembl:ENSMODG00000012449
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 1 NC_077227.1 (465350797..465396393)
103 previous assembly MonDom5 (GCF_000002295.2) 1 NC_008801.1 (458250195..458295855)

Chromosome 1 - NC_077227.1Genomic Context describing neighboring genes Neighboring gene phospholipid phosphatase 7 (inactive) Neighboring gene proline rich coiled-coil 2B Neighboring gene small nucleolar RNA SNORD62 Neighboring gene uncharacterized LOC103099369 Neighboring gene proline rich transmembrane protein 1B Neighboring gene uridine-cytidine kinase 1 Neighboring gene Rap guanine nucleotide exchange factor 1 Neighboring gene uncharacterized LOC130456463

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077227.1 Reference mMonDom1.pri

    Range
    465350797..465396393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007475175.3 → XP_007475237.1  protein O-mannosyl-transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_007475237.1

    UniProtKB/TrEMBL
    F6PJ87
    Conserved Domains (4) summary
    smart00472
    Location:299 → 356
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:14 → 720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:20 → 267
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:520 → 718
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase

  2. XM_001370198.5 → XP_001370235.2  protein O-mannosyl-transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_001370235.2

    UniProtKB/TrEMBL
    F6PJ87
    Related
    ENSMODP00000015583.2
    Conserved Domains (4) summary
    smart00472
    Location:299 → 356
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:14 → 720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:20 → 267
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:520 → 718
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase

  3. XM_007475176.3 → XP_007475238.1  protein O-mannosyl-transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_007475238.1

    UniProtKB/TrEMBL
    F6PJ87
    Conserved Domains (4) summary
    smart00472
    Location:299 → 356
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:14 → 720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:20 → 267
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:520 → 718
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase

  4. XM_056812593.1 → XP_056668571.1  protein O-mannosyl-transferase 1 isoform X2

RNA

  1. XR_458357.3 RNA Sequence

  2. XR_008915348.1 RNA Sequence

  3. XR_008915349.1 RNA Sequence

Nucleotide Protein
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