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RFX3 regulatory factor X3 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100014570, updated on 3-Feb-2018

Summary

Gene symbol
RFX3
Gene description
regulatory factor X3
See related
Ensembl:ENSMODG00000015410
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs

Genomic context

See RFX3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
22
Annotation release Status Assembly Chr Location
103 current MonDom5 (GCF_000002295.2) 6 NC_008806.1 (164613623..164964902, complement)

Chromosome 6 - NC_008806.1Genomic Context describing neighboring genes Neighboring gene histone-arginine methyltransferase CARM1-like Neighboring gene uncharacterized LOC103100916 Neighboring gene pumilio RNA binding family member 3 Neighboring gene lamina-associated polypeptide 2, isoforms beta/gamma pseudogene Neighboring gene uncharacterized LOC107649650 Neighboring gene tubulin alpha chain, testis-specific-like Neighboring gene uncharacterized LOC103102757 Neighboring gene GLIS family zinc finger 3

Genomic regions, transcripts, and products

Genomic Sequence:
NC_008806.1 Chromosome 6 Reference MonDom5 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
transcription factor RFX3
Names
regulatory factor X, 3 (influences HLA class II expression)

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Monodelphis domestica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MonDom5 Primary Assembly

Genomic

  1. NC_008806.1 Reference MonDom5 Primary Assembly

    Range
    164613623..164964902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007499529.2XP_007499591.1  transcription factor RFX3 isoform X2

    See identical proteins and their annotated locations for XP_007499591.1

    Conserved Domains (2) summary
    pfam02257
    Location:184256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51137
    RFX1_trans_act; RFX1 transcription activation region
  2. XM_007499524.1XP_007499586.1  transcription factor RFX3 isoform X1

    See identical proteins and their annotated locations for XP_007499586.1

    UniProtKB/TrEMBL
    F6T459
    Conserved Domains (2) summary
    pfam02257
    Location:188260
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:55141
    RFX1_trans_act; RFX1 transcription activation region
  3. XM_016424240.1XP_016279726.1  transcription factor RFX3 isoform X2

    Conserved Domains (2) summary
    pfam02257
    Location:184256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51137
    RFX1_trans_act; RFX1 transcription activation region
  4. XM_007499528.1XP_007499590.1  transcription factor RFX3 isoform X2

    See identical proteins and their annotated locations for XP_007499590.1

    Conserved Domains (2) summary
    pfam02257
    Location:184256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51137
    RFX1_trans_act; RFX1 transcription activation region
  5. XM_016424238.1XP_016279724.1  transcription factor RFX3 isoform X1

    UniProtKB/TrEMBL
    F6T459
    Related
    ENSMODP00000019237.3, ENSMODT00000019584.3
    Conserved Domains (2) summary
    pfam02257
    Location:188260
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:55141
    RFX1_trans_act; RFX1 transcription activation region
  6. XM_001364898.3XP_001364935.1  transcription factor RFX3 isoform X2

    See identical proteins and their annotated locations for XP_001364935.1

    Conserved Domains (2) summary
    pfam02257
    Location:184256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51137
    RFX1_trans_act; RFX1 transcription activation region
  7. XM_016424241.1XP_016279727.1  transcription factor RFX3 isoform X2

    Conserved Domains (2) summary
    pfam02257
    Location:184256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51137
    RFX1_trans_act; RFX1 transcription activation region
  8. XM_016424239.1XP_016279725.1  transcription factor RFX3 isoform X2

    Conserved Domains (2) summary
    pfam02257
    Location:184256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51137
    RFX1_trans_act; RFX1 transcription activation region
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