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AMOTL1 angiomotin like 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100013577, updated on 2-Apr-2017

Summary

Gene symbol
AMOTL1
Gene description
angiomotin like 1
See related
Ensembl:ENSMODG00000000180
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs

Genomic context

See AMOTL1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
18
Annotation release Status Assembly Chr Location
103 current MonDom5 (GCF_000002295.2) 4 NC_008804.1 (263950268..264220718, complement)

Chromosome 4 - NC_008804.1Genomic Context describing neighboring genes Neighboring gene endonuclease domain containing 1 Neighboring gene CWC15 spliceosome associated protein homolog Neighboring gene piwi like RNA-mediated gene silencing 4 Neighboring gene fucosyltransferase 4

Genomic regions, transcripts, and products

Genomic Sequence:
NC_008804.1 Chromosome 4 Reference MonDom5 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Tight junction, organism-specific biosystem (from KEGG)
    Tight junction, organism-specific biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...
  • Tight junction, conserved biosystem (from KEGG)
    Tight junction, conserved biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Monodelphis domestica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MonDom5 Primary Assembly

Genomic

  1. NC_008804.1 Reference MonDom5 Primary Assembly

    Range
    263950268..264220718 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016433903.1XP_016289389.1  angiomotin-like protein 1 isoform X1

  2. XM_007494994.2XP_007495056.1  angiomotin-like protein 1 isoform X4

    See identical proteins and their annotated locations for XP_007495056.1

    Conserved Domains (3) summary
    pfam10458
    Location:467532
    Val_tRNA-synt_C; Valyl tRNA synthetase tRNA binding arm
    pfam12240
    Location:517719
    Angiomotin_C; Angiomotin C terminal
    cl02488
    Location:349541
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
  3. XM_007494992.2XP_007495054.1  angiomotin-like protein 1 isoform X3

    Conserved Domains (2) summary
    pfam12240
    Location:554756
    Angiomotin_C; Angiomotin C terminal
    cl02488
    Location:386578
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
  4. XM_007494990.2XP_007495052.1  angiomotin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    F6TGA6
    Related
    ENSMODP00000000209.4, ENSMODT00000000213.4
    Conserved Domains (2) summary
    pfam12240
    Location:604806
    Angiomotin_C; Angiomotin C terminal
    cl02488
    Location:436628
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
  5. XM_007494993.2XP_007495055.1  angiomotin-like protein 1 isoform X4

    See identical proteins and their annotated locations for XP_007495055.1

    Conserved Domains (3) summary
    pfam10458
    Location:467532
    Val_tRNA-synt_C; Valyl tRNA synthetase tRNA binding arm
    pfam12240
    Location:517719
    Angiomotin_C; Angiomotin C terminal
    cl02488
    Location:349541
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
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