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Oog3 oogenesin 3 [ Mus musculus (house mouse) ]

Gene ID: 100012, updated on 8-Feb-2024

Summary

Official Symbol
Oog3provided by MGI
Official Full Name
oogenesin 3provided by MGI
Primary source
MGI:MGI:2684047
See related
Ensembl:ENSMUSG00000050810 AllianceGenome:MGI:2684047
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable ubiquitin ligase-substrate adaptor activity. Predicted to be involved in several processes, including negative regulation of apoptotic process; negative regulation of transcription, DNA-templated; and positive regulation of cell population proliferation. Predicted to be part of Cul2-RING ubiquitin ligase complex. Predicted to be active in cytoplasm. Orthologous to several human genes including PRAMEF1 (PRAME family member 1); PRAMEF10 (PRAME family member 10); and PRAMEF11 (PRAME family member 11). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Oog3 in Genome Data Viewer
Location:
4 E1; 4 77.98 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (143884126..143889221, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (144157556..144162651, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene PRAME like 4 Neighboring gene PRAME like 60 Neighboring gene STARR-seq mESC enhancer starr_11979 Neighboring gene STARR-seq mESC enhancer starr_11980 Neighboring gene oogenesin 2 Neighboring gene PRAME like 29

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201258.2NP_957710.2  oogenesin-3

    See identical proteins and their annotated locations for NP_957710.2

    Status: VALIDATED

    Source sequence(s)
    AK136030, BM227552, DV644761
    Consensus CDS
    CCDS51361.1
    UniProtKB/Swiss-Prot
    Q3UWY1, Q7TPT9
    Related
    ENSMUSP00000059834.9, ENSMUST00000050933.9

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    143884126..143889221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)