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RARA retinoic acid receptor alpha [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100009009, updated on 20-Feb-2025
Gene symbol
RARA
Gene description
retinoic acid receptor alpha
See related
Ensembl:ENSOCUG00000004903
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Also known as
RARALPHA
Orthologs
human mouse all
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See RARA in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 17 NC_091448.1 (22119935..22142288, complement)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 19 NC_067392.1 (39016365..39052275)

Chromosome 17 - NC_091448.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase II alpha Neighboring gene gap junction protein delta 3 Neighboring gene cell division cycle 6 Neighboring gene WAS/WASL interacting protein family member 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear glucocorticoid receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to corticotropin-releasing hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinoic acid receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
retinoic acid receptor alpha

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RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091448.1 Reference mOryCun1.1

    Range
    22119935..22142288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_070060737.1 → XP_069916838.1  retinoic acid receptor alpha isoform X2

    UniProtKB/TrEMBL
    A0A5F9DPM5, G1TI43

  2. XM_002719354.5 → XP_002719400.2  retinoic acid receptor alpha isoform X3

    UniProtKB/TrEMBL
    A0A5F9DPM5

  3. XM_051825668.2 → XP_051681628.2  retinoic acid receptor alpha isoform X1

    UniProtKB/TrEMBL
    A0A5F9DPM5
Nucleotide Protein
Heading Accession and Version

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