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CX3CR1 C-X3-C motif chemokine receptor 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100008874, updated on 17-Dec-2024
Gene symbol
CX3CR1
Gene description
C-X3-C motif chemokine receptor 1
See related
Ensembl:ENSOCUG00000027509
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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See CX3CR1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 10 NC_091441.1 (108090906..108109140)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 9 NC_067382.1 (111630920..111647851, complement)

Chromosome 10 - NC_091441.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 38 Neighboring gene C-C motif chemokine receptor 8 Neighboring gene uncharacterized LOC103349152 Neighboring gene uncharacterized LOC138844125 Neighboring gene xin actin binding repeat containing 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-C chemokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables C-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables C-X3-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
CX3C chemokine receptor 1
Names
C-X3-C CKR-1
Fractalkine receptor
chemokine (C-X3-C motif) receptor 1
chemokine receptor 1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082134.1 → NP_001075603.1  CX3C chemokine receptor 1

    See identical proteins and their annotated locations for NP_001075603.1

    Status: PROVISIONAL

    Source sequence(s)
    AM183335
    UniProtKB/Swiss-Prot
    Q2KTE1
    Related
    ENSOCUP00000024608.2, ENSOCUT00000028713.2
    Conserved Domains (1) summary
    pfam00001
    Location:49 → 294
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091441.1 Reference mOryCun1.1

    Range
    108090906..108109140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008260200.3 → XP_008258422.2  CX3C chemokine receptor 1 isoform X1

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2KTE1.1 GenPept UniProtKB/Swiss-Prot:Q2KTE1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials