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CD247 CD247 molecule [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100008617, updated on 3-Dec-2024
Gene symbol
CD247
Gene description
CD247 molecule
See related
Ensembl:ENSOCUG00000027626
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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See CD247 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 7 NC_091438.1 (31186544..31267652)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 13 NC_067386.1 (25769681..25850784)

Chromosome 7 - NC_091438.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene RCSD domain containing 1 Neighboring gene cellular repressor of E1A stimulated genes 1 Neighboring gene POU class 2 homeobox 1 Neighboring gene zinc finger CCHC-type and RNA-binding motif-containing protein 1-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha-beta T cell receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
T-cell surface glycoprotein CD3 zeta chain
Names
CD3 zeta
T-cell receptor T3 zeta chain

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082002.1 → NP_001075471.1  T-cell surface glycoprotein CD3 zeta chain precursor

    See identical proteins and their annotated locations for NP_001075471.1

    Status: PROVISIONAL

    Source sequence(s)
    AB035152
    UniProtKB/Swiss-Prot
    Q9TUF8
    UniProtKB/TrEMBL
    G1TT17
    Related
    ENSOCUP00000020187.3, ENSOCUT00000032174.3
    Conserved Domains (3) summary
    smart00077
    Location:70 → 89
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam02189
    Location:140 → 159
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam11628
    Location:28 → 58
    TCR_zetazeta; T-cell surface glycoprotein CD3 zeta chain

RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091438.1 Reference mOryCun1.1

    Range
    31186544..31267652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008263943.4 → XP_008262165.2  T-cell surface glycoprotein CD3 zeta chain isoform X1

    UniProtKB/TrEMBL
    G1TT17
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9TUF8.1 GenPept UniProtKB/Swiss-Prot:Q9TUF8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials