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si:dkey-105h12.2 si:dkey-105h12.2 [ Danio rerio (zebrafish) ]

Gene ID: 100006782, updated on 8-Dec-2018

Summary

Official Symbol
si:dkey-105h12.2provided by ZNC
Official Full Name
si:dkey-105h12.2provided by ZNC
Primary source
ZFIN:ZDB-GENE-131118-9
See related
Ensembl:ENSDARG00000041685
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio

Genomic context

See si:dkey-105h12.2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
34
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (21220709..21239449, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (21284977..21303713, complement)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene alpha-2-macroglobulin-like Neighboring gene ovostatin Neighboring gene uncharacterized LOC101886465 Neighboring gene upstream transcription factor 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 
extracellular space IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    21220709..21239449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001345402.8XP_001345438.6  alpha-2-macroglobulin-like

    Related
    ENSDARP00000127672.1, ENSDART00000155787.2
    Conserved Domains (6) summary
    cd02897
    Location:9581244
    A2M_2; Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester ...
    pfam00207
    Location:739827
    A2M; Alpha-2-macroglobulin family
    pfam01835
    Location:134225
    A2M_N; MG2 domain
    pfam07677
    Location:13521442
    A2M_recep; A-macroglobulin receptor
    pfam07678
    Location:10101246
    A2M_comp; A-macroglobulin complement component
    pfam07703
    Location:476617
    A2M_N_2; Alpha-2-macroglobulin family N-terminal region
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